<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10162" schemaVersion="0.65" public="true">
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        <keyDates>
            <depositionDate>2018-02-28</depositionDate>
            <releaseDate>2019-05-08</releaseDate>
            <updateDate>2019-05-08</updateDate>
        </keyDates>
        <title>Integrative structure and functional anatomy of a nuclear pore complex</title>
        <correspondingAuthor private="true">
            <firstName>Michael</firstName>
            <lastName>Rout</lastName>
            <organization type="academic">Laboratory of Cellular and Structural Biology, Rockefeller University</organization>
            <street>1230 York Avenue</street>
            <townOrCity>New York</townOrCity>
            <stateOrProvince>NY</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>10065</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <firstName>Michael</firstName>
            <lastName>Rout</lastName>
            <organization type="academic">Laboratory of Cellular and Structural Biology, Rockefeller University</organization>
            <street>1230 York Avenue</street>
            <townOrCity>New York</townOrCity>
            <stateOrProvince>NY</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>10065</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <firstName>Brian</firstName>
            <lastName>Chait</lastName>
            <organization type="academic">Laboratory of Mass Spectrometry and Gaseous Ion Chemistry, Rockefeller University</organization>
            <street>1230 York Avenue</street>
            <townOrCity>New York</townOrCity>
            <stateOrProvince>NY</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>10065</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <firstName>Andrej</firstName>
            <lastName>Sali</lastName>
            <organization type="academic">University of California San Francisco</organization>
            <street>UCSF MC 2552, Byers Hall at Mission Bay, Suite 503B, 1700 4th Street</street>
            <townOrCity>San Francisco</townOrCity>
            <stateOrProvince>NY</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>94158</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-3059-3121</authorORCID>
            <firstName>Christopher</firstName>
            <lastName>Akey</lastName>
            <organization type="academic">Department of Physiology and Biophysics, Boston University School of Medicine</organization>
            <street>700 Albany Street</street>
            <townOrCity>Boston</townOrCity>
            <stateOrProvince>MA</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>02118</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <firstName>Steven</firstName>
            <lastName>Ludtke</lastName>
            <organization type="academic">National Center for Macromolecular Imaging, Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine</organization>
            <street>1 Baylor Plaza</street>
            <townOrCity>Houston</townOrCity>
            <stateOrProvince>TX</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>77030</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author>Kim SJ</author>
            <author>Fernandez-Martinez J</author>
            <author>Nudelman I</author>
            <author authorORCID="0000-0002-2761-8324">Shi Y</author>
            <author>Zhang W</author>
            <author>Raveh B</author>
            <author>Herricks T</author>
            <author>Slaughter BD</author>
            <author>Hogan JA</author>
            <author>Upla P</author>
            <author>Chemmama IE</author>
            <author>Pellarin R</author>
            <author>Echeverria I</author>
            <author>Shivaraju M</author>
            <author authorORCID="0000-0002-1977-8205">Chaudhury AS</author>
            <author>Wang J</author>
            <author>Williams R</author>
            <author authorORCID="0000-0003-3077-4990">Unruh JR</author>
            <author>Greenberg CH</author>
            <author>Jacobs EY</author>
            <author>Yu Z</author>
            <author authorORCID="0000-0002-8573-5406">de la Cruz MJ</author>
            <author>Mironska R</author>
            <author>Stokes DL</author>
            <author>Aitchison JD</author>
            <author>Jarrold MF</author>
            <author>Gerton JL</author>
            <author>Ludtke SJ</author>
            <author authorORCID="0000-0002-3059-3121">Akey CW</author>
            <author>Chait BT</author>
            <author>Sali A</author>
            <author>Rout MP</author>
        </authorsList>
        <versionHistory>
            <version>
                <versionNumber>1</versionNumber>
                <date>2019-05-08</date>
                <statusCode>REL</statusCode>
                <details>Added class averages.</details>
            </version>
        </versionHistory>
        <datasetSize units="GB">11.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-10162</entryDOI>
        <experimentType>EMDB</experimentType>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-7321</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author order="1">Kim SJ</author>
                    <author order="2">Fernandez-Martinez J</author>
                    <author order="3">Nudelman I</author>
                    <author authorORCID="0000-0002-2761-8324" order="4">Shi Y</author>
                    <author order="5">Zhang W</author>
                    <author order="6">Raveh B</author>
                    <author order="7">Herricks T</author>
                    <author order="8">Slaughter BD</author>
                    <author order="9">Hogan JA</author>
                    <author order="10">Upla P</author>
                    <author order="11">Chemmama IE</author>
                    <author order="12">Pellarin R</author>
                    <author order="13">Echeverria I</author>
                    <author order="14">Shivaraju M</author>
                    <author authorORCID="0000-0002-1977-8205" order="15">Chaudhury AS</author>
                    <author order="16">Wang J</author>
                    <author order="17">Williams R</author>
                    <author authorORCID="0000-0003-3077-4990" order="18">Unruh JR</author>
                    <author order="19">Greenberg CH</author>
                    <author order="20">Jacobs EY</author>
                    <author order="21">Yu Z</author>
                    <author authorORCID="0000-0002-8573-5406" order="22">de la Cruz MJ</author>
                    <author order="23">Mironska R</author>
                    <author order="24">Stokes DL</author>
                    <author order="25">Aitchison JD</author>
                    <author order="26">Jarrold MF</author>
                    <author order="27">Gerton JL</author>
                    <author order="28">Ludtke SJ</author>
                    <author authorORCID="0000-0002-3059-3121" order="29">Akey CW</author>
                    <author order="30">Chait BT</author>
                    <author order="31">Sali A</author>
                    <author order="32">Rout MP</author>
                    <title>Integrative structure and functional anatomy of a nuclear pore complex</title>
                    <journal>Nature</journal>
                    <journalAbbreviation>Nature</journalAbbreviation>
                    <country></country>
                    <issue>7697</issue>
                    <volume>555</volume>
                    <firstPage>475</firstPage>
                    <lastPage>482</lastPage>
                    <year>2018</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/nature26003</externalReferences>
                    <externalReferences type="pubmed">29539637</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Raw micrographs of Nic96 complex</name>
        <directory>/data/Nic96complex_micrographs</directory>
        <category>micrographs - single frame</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>1505</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>UNSIGNED 16 BIT INTEGER</voxelType>
        <dimensions>
            <imageWidth>2048</imageWidth>
            <pixelWidth>2.03</pixelWidth>
            <imageHeight>2048</imageHeight>
            <pixelHeight>2.03</pixelHeight>
        </dimensions>
        <details></details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Sc Nic96 complex class averages</name>
        <directory>/data/Classaverages</directory>
        <category>class averages</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>34</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>128</imageWidth>
            <pixelWidth>2.03</pixelWidth>
            <imageHeight>128</imageHeight>
            <pixelHeight>2.03</pixelHeight>
        </dimensions>
        <details>Nic96 complex class averages are of 4702 particles, generated by Iterative Stable Alignment and Clustering (ISAC).</details>
        <segmentationList/>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
