<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10443" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2020-06-11</depositionDate>
            <releaseDate>2020-08-18</releaseDate>
            <updateDate>2020-08-18</updateDate>
        </keyDates>
        <title>Mechanism of Ribosome Rescue by Alternative Release Factor B</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-4609-4052</authorORCID>
            <firstName>Niels</firstName>
            <lastName>Fischer</lastName>
            <organization type="academic">Max-Planck-Institute for Biophysical Chemistry</organization>
            <street>Am Fassberg 11</street>
            <townOrCity>Göttingen</townOrCity>
            <stateOrProvince>Lower Saxony</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>37073</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-0105-3879</authorORCID>
            <firstName>Marina</firstName>
            <middleName>V.</middleName>
            <lastName>Rodnina</lastName>
            <organization type="academic">Max-Planck-Institute for Biophysical Chemistry</organization>
            <street>Am Fassberg 11</street>
            <townOrCity>Göttingen</townOrCity>
            <stateOrProvince>Lower Saxony</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>37073</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-4609-4052</authorORCID>
            <firstName>Niels</firstName>
            <lastName>Fischer</lastName>
            <organization type="academic">Max-Planck-Institute for Biophysical Chemistry</organization>
            <street>Am Fassberg 11</street>
            <townOrCity>Göttingen</townOrCity>
            <stateOrProvince>Lower Saxony</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>37073</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-3816-3828</authorORCID>
            <firstName>Daniel</firstName>
            <middleName>N.</middleName>
            <lastName>Wilson</lastName>
            <organization type="academic">University of Hamburg</organization>
            <street>Martin-Luther-King-Platz 6</street>
            <townOrCity>Hamburg</townOrCity>
            <stateOrProvince>Hamburg</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>20146</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-1286-774X">Chan K-H</author>
            <author authorORCID="0000-0001-9867-9493">Petrychenko V</author>
            <author authorORCID="0000-0001-6044-7128">Mueller C</author>
            <author authorORCID="0000-0003-3810-7180">Maracci C</author>
            <author>Holtkamp W</author>
            <author authorORCID="0000-0003-3816-3828">Wilson DN</author>
            <author authorORCID="0000-0002-4609-4052">Fischer N</author>
            <author authorORCID="0000-0003-0105-3879">Rodnina MV</author>
        </authorsList>
        <datasetSize units="GB">788.2</datasetSize>
        <entryDOI>10.6019/EMPIAR-10443</entryDOI>
        <experimentType>EMDB</experimentType>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-10905</emdbEntry>
            <emdbEntry>EMD-10906</emdbEntry>
            <emdbEntry>EMD-10907</emdbEntry>
            <emdbEntry>EMD-10908</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author authorORCID="0000-0002-1286-774X" order="1">Chan K-H</author>
                    <author authorORCID="0000-0001-9867-9493" order="2">Petrychenko V</author>
                    <author authorORCID="0000-0001-6044-7128" order="3">Mueller C</author>
                    <author authorORCID="0000-0003-3810-7180" order="4">Maracci C</author>
                    <author order="5">Holtkamp W</author>
                    <author authorORCID="0000-0003-3816-3828" order="6">Wilson DN</author>
                    <author authorORCID="0000-0002-4609-4052" order="7">Fischer N</author>
                    <author authorORCID="0000-0003-0105-3879" order="8">Rodnina MV</author>
                    <editor authorORCID="0000-0002-4594-4342" order="1">Larochelle SL</editor>
                    <title>Mechanism of Ribosome Rescue by Alternative Release Factor B</title>
                    <journal>Nature Communications</journal>
                    <journalAbbreviation>Nat. Commun.</journalAbbreviation>
                    <country>United Kingdom</country>
                    <issue>1</issue>
                    <volume>11</volume>
                    <year>2020</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1038/s41467-020-17853-7</externalReferences>
                    <externalReferences type="pubmed">27906160</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Motion-corrected, dose-weighted micrographs &amp; polished particles of P+9 E. coli ribosome-ArfB complex</name>
        <directory>/data/P+9 E. Coli ribosome-ArfB complex</directory>
        <category>micrographs - single frame</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>MRC</dataFormat>
        <numImagesOrTiltSeries>4750</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>1.16</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>1.16</pixelHeight>
        </dimensions>
        <details>Note: Micrographs were obtained from movie-stacks of 40 frames à 1.25 e/A^2 by global motion-correction and dose-weighting using MotionCor2 in Relion, "shiny" particles were obtained by Baysian polishing in Relion 3.0
- Micrographs .star-file: "micrographs_ctf.star"
- Particles .star-file for all particles: "particles_all.star"
- Particles .star-file for particles of the P+9 stalled ribosome complex (EMD-10905): "particles_P+9_stalled_complex.star"
- Particles .star-file for particles of P+9 ArfB-ribosome complex in the post-hydrolysis state (EMD-10906): "particles_P+9 post-hydrolysis state.star"
- Particles .star-file for particles of P+9 ArfB-ribosome complex with P/E hybrid tRNA  in the post-hydrolysis state (EMD-10907): "particles_P+9 post-hydrolysis state with PE hybrid tRNA.star"</details>
        <segmentationList/>
        <micrographsFilePattern>data/P+9 E. Coli ribosome-ArfB complex/Micrographs/FoilHole_*_Data_*_Fractions.mrc</micrographsFilePattern>
        <pickedParticlesFilePattern>data/P+9 E. Coli ribosome-ArfB complex/particles_*.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/P+9 E. Coli ribosome-ArfB complex/Particles</pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Motion-corrected, dose-weighted micrographs &amp; extracted particles of P+0 E. coli ribosome-ArfB complex</name>
        <directory>/data/P+0 E. Coli ribosome-ArfB complex</directory>
        <category>micrographs - single frame</category>
        <headerFormat>MRC</headerFormat>
        <dataFormat>MRC</dataFormat>
        <numImagesOrTiltSeries>3633</numImagesOrTiltSeries>
        <framesPerImage>1</framesPerImage>
        <voxelType>32 BIT FLOAT</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>1.072</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>1.072</pixelHeight>
        </dimensions>
        <details>Note: Micrographs were obtained from movie-stacks of 10 frames à 2.5 e/A^2 by global motion-correction and dose-weighting using MotionCor2 in Relion
- Micrographs .star-file: "micrographs_ctf.star"
- Particles .star-file for particles of P+0 ArfB-ribosome complex in the post-hydrolysis state (EMD-10908): "particles_P+0 post-hydrolysis state.star"</details>
        <segmentationList/>
        <micrographsFilePattern>data/P+0 E. Coli ribosome-ArfB complex/Micrographs/sum_mc2_0to9_*.mrc</micrographsFilePattern>
        <pickedParticlesFilePattern>data/P+0 E. Coli ribosome-ArfB complex/particles_P+0 post-hydrolysis state.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/P+0 E. Coli ribosome-ArfB complex/Particles</pickedParticlesDirectory>
    </imageSet>
</entry>
