<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-10554" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2020-09-09</depositionDate>
            <releaseDate>2021-04-30</releaseDate>
            <updateDate>2022-06-13</updateDate>
        </keyDates>
        <title>FIB-SEM of Tuwongella immobilis - a species of the Planctomycetes phylum</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0003-0241-9158</authorORCID>
            <firstName>Christian</firstName>
            <lastName>Seeger</lastName>
            <organization type="academic">Molecular Evolution, Department of Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, Uppsala, Sweden</organization>
            <street>Husargatan 3</street>
            <townOrCity>Uppsala</townOrCity>
            <stateOrProvince>Uppsala</stateOrProvince>
            <country>Sweden</country>
            <postOrZipCode>75124</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-0864-0259</authorORCID>
            <firstName>Siv</firstName>
            <lastName>Andersson</lastName>
            <organization type="academic">Molecular Evolution, Department of Cell and Molecular Biology, Science for Life Laboratory, Biomedical Centre, Uppsala University, Uppsala, Sweden</organization>
            <street>Husargatan 3</street>
            <townOrCity>Uppsala</townOrCity>
            <country>Sweden</country>
            <postOrZipCode>75124</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0003-0864-0259">Andersson SGE</author>
            <author>Odelgard A</author>
            <author>Dyrhage K</author>
            <author>Mahajan M</author>
            <author>Seeger C</author>
        </authorsList>
        <datasetSize units="GB">6.7</datasetSize>
        <entryDOI>10.6019/EMPIAR-10554</entryDOI>
        <experimentType>FIB-SEM</experimentType>
    </admin>
    <crossReferences>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="false">
                    <author order="1">Andersson SGE</author>
                    <author order="2">Seeger C</author>
                    <author order="3">Dyrhage K</author>
                    <author order="4">Mahajan M</author>
                    <author order="5">Odelgard A</author>
                    <author order="6">Bergström Lind S</author>
                    <title>The Subcellular Proteome of a Planctomycetes Bacterium Shows that Newly Evolved Proteins have Distinct Fractionation Patterns</title>
                    <journal></journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                    <externalReferences type="doi">10.3389/fmicb.2021.643045</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Aligned FIB-SEM micrographs from Tuwongella immobilis</name>
        <directory>/data</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>1</numImagesOrTiltSeries>
        <framesPerImage>464</framesPerImage>
        <frameRange>
            <frameRangeMin>1</frameRangeMin>
            <frameRangeMax>464</frameRangeMax>
        </frameRange>
        <voxelType>UNSIGNED 16 BIT INTEGER</voxelType>
        <dimensions>
            <imageWidth>3720</imageWidth>
            <pixelWidth>1.0</pixelWidth>
            <imageHeight>2082</imageHeight>
            <pixelHeight>1.0</pixelHeight>
        </dimensions>
        <details>GainRef.mrc can be used with 270 degrees rotation</details>
        <segmentationList>
            <segmentation segmentationId="58">
                <file>data/181129_3dmod_Timmobilis_C1.mod</file>
                <description>Segmentation of T. immobilis cell "C1"</description>
                <originalFiles>data/181129_3dmod_Timmobilis_C1.mod</originalFiles>
                <originalFormat>MOD</originalFormat>
            </segmentation>
            <segmentation segmentationId="59">
                <file>data/181129_3dmod_Timmobilis_C2.mod</file>
                <description>Segmentation of T. immobilis cell "C2"</description>
                <originalFiles>data/181129_3dmod_Timmobilis_C2.mod</originalFiles>
                <originalFormat>MOD</originalFormat>
            </segmentation>
            <segmentation segmentationId="60">
                <file>data/181129_3dmod_Timmobilis_C3.mod</file>
                <description>Segmentation of T. immobilis cell "C3"</description>
                <originalFiles>data/181129_3dmod_Timmobilis_C3.mod</originalFiles>
                <originalFormat>MOD</originalFormat>
            </segmentation>
            <segmentation segmentationId="61">
                <file>data/181129_3dmod_Timmobilis_C4.mod</file>
                <description>Segmentation of T. immobilis cell "C4"</description>
                <originalFiles>data/181129_3dmod_Timmobilis_C4.mod</originalFiles>
                <originalFormat>MOD</originalFormat>
            </segmentation>
            <segmentation segmentationId="62">
                <file>data/181129_3dmod_Timmobilis_C5.mod</file>
                <description>Segmentation of T. immobilis cell "C5"</description>
                <originalFiles>data/181129_3dmod_Timmobilis_C5.mod</originalFiles>
                <originalFormat>MOD</originalFormat>
            </segmentation>
            <segmentation segmentationId="63">
                <file>data/181129_3dmod_Timmobilis_C6.mod</file>
                <description>Segmentation of T. immobilis cell "C6"</description>
                <originalFiles>data/181129_3dmod_Timmobilis_C6.mod</originalFiles>
                <originalFormat>MOD</originalFormat>
            </segmentation>
        </segmentationList>
        <micrographsFilePattern></micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
