<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-11802" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2023-11-27</depositionDate>
            <releaseDate>2025-02-21</releaseDate>
            <updateDate>2025-02-21</updateDate>
        </keyDates>
        <title>AL amyloid fibril from the FOR010 light chain</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-9442-460X</authorORCID>
            <firstName>Matthias</firstName>
            <lastName>Schmidt</lastName>
            <organization type="academic">Institut für Proteinbiochemie, Universität Ulm</organization>
            <street>8/1 Helmholtzstrasse</street>
            <townOrCity>Ulm</townOrCity>
            <stateOrProvince>Baden Württemberg</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>89081</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0003-2123-6816</authorORCID>
            <firstName>Marcus</firstName>
            <lastName>Fändrich</lastName>
            <organization type="academic">Institut für Proteinbiochemie, Universität Ulm</organization>
            <street>8/1 Helmholtzstrasse</street>
            <townOrCity>Ulm</townOrCity>
            <stateOrProvince>Baden Württemberg</stateOrProvince>
            <country>Germany</country>
            <postOrZipCode>89081</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0009-0004-3946-3579">Pfeiffer PB</author>
            <author>Banerjee S</author>
            <author authorORCID="0000-0002-9442-460X">Schmidt M</author>
            <author authorORCID="0000-0003-2123-6816">Fändrich M</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>German Research Foundation (DFG)</fundingBody>
                <code>FA 456/23</code>
                <country>Germany</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">1.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-11802</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>molecule</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-18881</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="false" preprint="false">
                    <author authorORCID="0000-0003-2513-1499" order="1">Karimi-Farsijani S</author>
                    <author authorORCID="0009-0004-3946-3579" order="2">Pfeiffer PB</author>
                    <author order="3">Banerjee S</author>
                    <author order="4">Baur J</author>
                    <author order="5">Kuhn L</author>
                    <author order="6">Kupfer N</author>
                    <author order="7">Hegenbart U</author>
                    <author order="8">Schönland SO</author>
                    <author order="9">Wiese S</author>
                    <author order="10">Haupt C</author>
                    <author authorORCID="0000-0002-9442-460X" order="11">Schmidt M</author>
                    <author authorORCID="0000-0003-2123-6816" order="12">Fändrich M</author>
                    <title>Light chain mutations contribute to defining the fibril morphology  in systemic AL amyloidosis</title>
                    <journal></journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame micrographs of FOR010 amyloid fibrils</name>
        <directory>/data/eer</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>EER</headerFormat>
        <dataFormat>EER</dataFormat>
        <numImagesOrTiltSeries>4008</numImagesOrTiltSeries>
        <framesPerImage>963</framesPerImage>
        <voxelType>BIT</voxelType>
        <dimensions>
            <imageWidth>4096</imageWidth>
            <pixelWidth>0.934</pixelWidth>
            <imageHeight>4096</imageHeight>
            <pixelHeight>0.934</pixelHeight>
        </dimensions>
        <details>IC-Krios1 G4 300kV C-FEG
SelectrisX 10eV slit width, Falcon4i
Cs=2.7mm, C2aperture=50um, ObjAperture=100um
EFTEM 130kx, nanoprobe spot 5, beam=630nm
Counting mode, 1pix=0.934 A
~3 s exposure, EER files save (963 fractions, not gain corrected)
~40 e/A^2 total dose

The gain reference (/data/micrographs/20220808_133943_EER_GainReference.gain) is not applied to the micrographs. The NOTES.txt file contains EM information. Thumbnails and power spectra (data/thumbnails) as well as coordinates (/data/Manual_Pick) are provided.</details>
        <segmentationList/>
        <micrographsFilePattern>data/eer/*.eer</micrographsFilePattern>
        <pickedParticlesFilePattern>data/Manual_Pick/*.star</pickedParticlesFilePattern>
        <pickedParticlesDirectory>data/Manual_Pick</pickedParticlesDirectory>
    </imageSet>
</entry>
