<entry xmlns="http://pdbe.org/empiar" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="https://ftp.ebi.ac.uk/pub/databases/emtest/empiar/schema/empiar.xsd" accessionCode="EMPIAR-12958" schemaVersion="0.65" public="true">
    <admin>
        <currentStatus>REL</currentStatus>
        <keyDates>
            <depositionDate>2025-09-04</depositionDate>
            <releaseDate>2025-09-30</releaseDate>
            <updateDate>2025-09-30</updateDate>
        </keyDates>
        <title>Montaged cryo-electron micrographs of candida albicans cells</title>
        <correspondingAuthor private="true">
            <authorORCID>0000-0002-9911-706X</authorORCID>
            <firstName>Johannes</firstName>
            <lastName>Elferich</lastName>
            <organization type="academic">RTI, UMass Chan Medical School</organization>
            <street>55 N Lake Ave</street>
            <townOrCity>Worcester</townOrCity>
            <stateOrProvince>Massachusetts</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>01655</postOrZipCode>
        </correspondingAuthor>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-1506-909X</authorORCID>
            <firstName>Nikolaus</firstName>
            <lastName>Grigorieff</lastName>
            <organization type="academic">RTI, UMass Chan Medical School</organization>
            <street>55 N Lake Ave</street>
            <townOrCity>Worcester</townOrCity>
            <stateOrProvince>Massachusetts</stateOrProvince>
            <country>United States</country>
            <postOrZipCode>01655</postOrZipCode>
        </principalInvestigator>
        <principalInvestigator private="true">
            <authorORCID>0000-0002-5216-5013</authorORCID>
            <firstName>Robert</firstName>
            <lastName>Arkowitz</lastName>
            <organization type="academic">Institute of Biology Valrose - Univ. of Côte d’Azur</organization>
            <street>Parc Valrose</street>
            <townOrCity>Nice</townOrCity>
            <country>France</country>
            <postOrZipCode>06108</postOrZipCode>
        </principalInvestigator>
        <authorsList>
            <author authorORCID="0000-0002-9911-706X">Elferich J</author>
            <author authorORCID="0009-0006-2364-5428">Plumb E</author>
            <author authorORCID="0000-0002-1506-909X">Grigorieff N</author>
            <author authorORCID="0000-0002-5216-5013">Arkowitz R</author>
        </authorsList>
        <grantSupport>
            <grantReference>
                <fundingBody>Howard Hughes Medical Institute (HHMI)</fundingBody>
                <code>N/A</code>
                <country>United States</country>
            </grantReference>
        </grantSupport>
        <datasetSize units="TB">2.8</datasetSize>
        <entryDOI>10.6019/EMPIAR-12958</entryDOI>
        <experimentType>EMDB</experimentType>
        <scale>cell</scale>
    </admin>
    <crossReferences>
        <relatedEMDBEntries>
            <emdbEntry>EMD-72486</emdbEntry>
            <emdbEntry>EMD-72488</emdbEntry>
            <emdbEntry>EMD-72489</emdbEntry>
            <emdbEntry>EMD-72490</emdbEntry>
            <emdbEntry>EMD-72464</emdbEntry>
        </relatedEMDBEntries>
        <citationList>
            <universalCitation>
                <journalCitation published="true" preprint="true">
                    <author authorORCID="0000-0002-5678-8023" order="1">Serrano A</author>
                    <author authorORCID="0000-0002-4402-0295" order="2">Puerner C</author>
                    <author authorORCID="0009-0006-2364-5428" order="3">Plumb E</author>
                    <author order="4">Chevalier L</author>
                    <author authorORCID="0000-0002-9911-706X" order="5">Elferich J</author>
                    <author authorORCID="0000-0003-4692-0681" order="6">Sinn L</author>
                    <author authorORCID="0000-0002-1506-909X" order="7">Grigorieff N</author>
                    <author authorORCID="0000-0001-9535-7413" order="8">Ralser M</author>
                    <author authorORCID="0000-0003-1114-298X" order="9">Delarue M</author>
                    <author authorORCID="0000-0001-9965-567X" order="10">Bassilana M</author>
                    <author authorORCID="0000-0002-5216-5013" order="11">Arkowitz R</author>
                    <title>Dynamic cytoplasmic fluidity during morphogenesis in a human fungal pathogen</title>
                    <journal>bioRxiv</journal>
                    <journalAbbreviation></journalAbbreviation>
                    <country></country>
                    <year>2024</year>
                    <language>English</language>
                    <externalReferences type="doi">10.1101/2024.11.16.623909</externalReferences>
                </journalCitation>
            </universalCitation>
        </citationList>
    </crossReferences>
    <imageSet>
        <name>Unaligned multi-frame microgaphs of candida albicans cells thinned using FIB - Filamentous Control</name>
        <directory>/data/fil_C_glyc</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>5214</numImagesOrTiltSeries>
        <framesPerImage>30</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.524</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.524</pixelHeight>
        </dimensions>
        <details>Gain reference is in same folder as frames and does not require transformations</details>
        <segmentationList/>
        <micrographsFilePattern>data/fil_C_glyc/area*/frames/*.tif</micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Unaligned multi-frame microgaphs of candida albicans cells thinned using FIB - Filamentous Condition</name>
        <directory>/data/fil_90min_glyc</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2709</numImagesOrTiltSeries>
        <framesPerImage>30</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.524</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.524</pixelHeight>
        </dimensions>
        <details>Gain reference is in same folder as frames and does not require transformations</details>
        <segmentationList/>
        <micrographsFilePattern>data/fil_90min_glyc/area*/frames/*.tif</micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Unaligned multi-frame microgaphs of candida albicans cells thinned using FIB - Fluconazole treated</name>
        <directory>/data/drug_g2</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2862</numImagesOrTiltSeries>
        <framesPerImage>30</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.524</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.524</pixelHeight>
        </dimensions>
        <details>Gain reference is in same folder as frames and does not require transformations</details>
        <segmentationList/>
        <micrographsFilePattern>data/drug_g2/area*/frames/*.tif</micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
    <imageSet>
        <name>Unaligned multi-frame microgaphs of candida albicans cells thinned using FIB - Fluconazole Control</name>
        <directory>/data/C_g1</directory>
        <category>micrographs - multiframe</category>
        <headerFormat>TIFF</headerFormat>
        <dataFormat>TIFF</dataFormat>
        <numImagesOrTiltSeries>2960</numImagesOrTiltSeries>
        <framesPerImage>30</framesPerImage>
        <voxelType>UNSIGNED BYTE</voxelType>
        <dimensions>
            <imageWidth>11520</imageWidth>
            <pixelWidth>0.524</pixelWidth>
            <imageHeight>8184</imageHeight>
            <pixelHeight>0.524</pixelHeight>
        </dimensions>
        <details>Gain reference is in same folder as frames and does not require transformations</details>
        <segmentationList/>
        <micrographsFilePattern>data/C_g1/area*/frames/*.tif</micrographsFilePattern>
        <pickedParticlesFilePattern></pickedParticlesFilePattern>
        <pickedParticlesDirectory></pickedParticlesDirectory>
    </imageSet>
</entry>
